J4_9I5V_007
3D structure
- PDB id
- 9I5V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S P. gingivalis ribosome erm-delta-porN strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGUC*GAC*GGUAAG*CGGC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I5V|1|A|G|2644
9I5V|1|A|G|2645
9I5V|1|A|U|2646
9I5V|1|A|C|2647
*
9I5V|1|A|G|2675
9I5V|1|A|A|2676
9I5V|1|A|C|2677
*
9I5V|1|A|G|2732
9I5V|1|A|G|2733
9I5V|1|A|U|2734
9I5V|1|A|A|2735
9I5V|1|A|A|2736
9I5V|1|A|G|2737
*
9I5V|1|A|C|2769
9I5V|1|A|G|2770
9I5V|1|A|G|2771
9I5V|1|A|C|2772
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 15
- DUF4295 domain-containing protein
- Chain E
- Large ribosomal subunit protein uL3
- Chain M
- Large ribosomal subunit protein uL13
- Chain N
- Large ribosomal subunit protein uL14
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