J4_9I5V_010
3D structure
- PDB id
- 9I5V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S P. gingivalis ribosome erm-delta-porN strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGG*CGAAGG*CAGUAAACGAU(7MG)*CC
- Length
- 23 nucleotides
- Bulged bases
- 9I5V|1|a|A|815
- QA status
- Modified nucleotides: 7MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I5V|1|a|G|575
9I5V|1|a|G|576
9I5V|1|a|G|577
*
9I5V|1|a|C|764
9I5V|1|a|G|765
9I5V|1|a|A|766
9I5V|1|a|A|767
9I5V|1|a|G|768
9I5V|1|a|G|769
*
9I5V|1|a|C|810
9I5V|1|a|A|811
9I5V|1|a|G|812
9I5V|1|a|U|813
9I5V|1|a|A|814
9I5V|1|a|A|815
9I5V|1|a|A|816
9I5V|1|a|C|817
9I5V|1|a|G|818
9I5V|1|a|A|819
9I5V|1|a|U|820
9I5V|1|a|7MG|821
*
9I5V|1|a|C|878
9I5V|1|a|C|879
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain 10
- AURKAIP1/COX24 domain-containing protein
- Chain 9
- Small ribosomal subunit protein bS21
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain e
- Small ribosomal subunit protein uS17
- Chain f
- Small ribosomal subunit protein uS15
- Chain j
- Small ribosomal subunit protein uS12
- Chain o
- Small ribosomal subunit protein uS8
Coloring options: