J4_9JMK_008

3D structure

PDB id

9JMK (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Ribosomal Subunit precursor state III

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GGGC*GAC*GAAG*UGC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JMK|1|A|G|2643
9JMK|1|A|G|2644
9JMK|1|A|G|2645
9JMK|1|A|C|2646
*
9JMK|1|A|G|2674
9JMK|1|A|A|2675
9JMK|1|A|C|2676
*
9JMK|1|A|G|2732
9JMK|1|A|A|2733
9JMK|1|A|A|2734
9JMK|1|A|G|2735
*
9JMK|1|A|U|2769
9JMK|1|A|G|2770
9JMK|1|A|C|2771

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain K

50S ribosomal protein L14