J4_9JPO_002

3D structure

PDB id

9JPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Lys(mcm5h2U34) and mRNA(AAA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.18 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

9JPO|1|A|C|183, 9JPO|1|A|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JPO|1|A|G|142
9JPO|1|A|A|143
9JPO|1|A|G|144
*
9JPO|1|A|C|178
9JPO|1|A|A|179
9JPO|1|A|U|180
9JPO|1|A|A|181
9JPO|1|A|A|182
9JPO|1|A|C|183
9JPO|1|A|G|184
*
9JPO|1|A|C|193
9JPO|1|A|C|194
9JPO|1|A|A|195
9JPO|1|A|A|196
9JPO|1|A|A|197
9JPO|1|A|G|198
*
9JPO|1|A|U|219
9JPO|1|A|G|220
9JPO|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20