J4_9JQ2_002

3D structure

PDB id

9JQ2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Lys(mcm5h2U34) and mRNA(AAG)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.61 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

9JQ2|1|A|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JQ2|1|A|G|142
9JQ2|1|A|A|143
9JQ2|1|A|G|144
*
9JQ2|1|A|C|178
9JQ2|1|A|A|179
9JQ2|1|A|U|180
9JQ2|1|A|A|181
9JQ2|1|A|A|182
9JQ2|1|A|C|183
9JQ2|1|A|G|184
*
9JQ2|1|A|C|193
9JQ2|1|A|C|194
9JQ2|1|A|A|195
9JQ2|1|A|A|196
9JQ2|1|A|A|197
9JQ2|1|A|G|198
*
9JQ2|1|A|U|219
9JQ2|1|A|G|220
9JQ2|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20