J4_9JQ2_008

3D structure

PDB id

9JQ2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Lys(mcm5h2U34) and mRNA(AAG)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.61 Å

Loop

Sequence

CAAG*CGAAG*CGAG*CGUUAAG

Length

20 nucleotides

Bulged bases

9JQ2|1|a|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JQ2|1|a|C|601
9JQ2|1|a|A|602
9JQ2|1|a|A|603
9JQ2|1|a|G|604
*
9JQ2|1|a|C|624
9JQ2|1|a|G|625
9JQ2|1|a|A|626
9JQ2|1|a|A|627
9JQ2|1|a|G|628
*
9JQ2|1|a|C|635
9JQ2|1|a|G|636
9JQ2|1|a|A|637
9JQ2|1|a|G|638
*
9JQ2|1|a|C|650
9JQ2|1|a|G|651
9JQ2|1|a|U|652
9JQ2|1|a|U|653
9JQ2|1|a|A|654
9JQ2|1|a|A|655
9JQ2|1|a|G|656

Current chains

Chain a

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L35

Chain e

50S ribosomal protein L4

Chain k

50S ribosomal protein L15