J4_9K0Z_007

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

CGAUUAG*CC*GUAC*GG

Length

15 nucleotides

Bulged bases

9K0Z|1|h|G|1386, 9K0Z|1|h|U|1389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K0Z|1|h|C|1385
9K0Z|1|h|G|1386
9K0Z|1|h|A|1387
9K0Z|1|h|U|1388
9K0Z|1|h|U|1389
9K0Z|1|h|A|1390
9K0Z|1|h|G|1391
*
9K0Z|1|h|C|1409
9K0Z|1|h|C|1410
*
9K0Z|1|h|G|1863
9K0Z|1|h|U|1864
9K0Z|1|h|A|1865
9K0Z|1|h|C|1866
*
9K0Z|1|h|G|2233
9K0Z|1|h|G|2234

Current chains

Chain h

23S ribosomal RNA

Nearby chains

Chain b

Large ribosomal subunit protein bL32

Chain u

Large ribosomal subunit protein bL17

Chain z

Large ribosomal subunit protein uL22