J4_9K0Z_014

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

AACC*GAC*GGACA*UCU

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K0Z|1|h|A|2867
9K0Z|1|h|A|2868
9K0Z|1|h|C|2869
9K0Z|1|h|C|2870
*
9K0Z|1|h|G|2898
9K0Z|1|h|A|2899
9K0Z|1|h|C|2900
*
9K0Z|1|h|G|2955
9K0Z|1|h|G|2956
9K0Z|1|h|A|2957
9K0Z|1|h|C|2958
9K0Z|1|h|A|2959
*
9K0Z|1|h|U|2993
9K0Z|1|h|C|2994
9K0Z|1|h|U|2995

Current chains

Chain h

23S ribosomal RNA

Nearby chains

Chain j

Large ribosomal subunit protein uL3

Chain q

Large ribosomal subunit protein uL13

Chain r

50S ribosomal protein L14