J4_9MKK_001

3D structure

PDB id

9MKK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of arbekacin bound Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAGUAAUGU*AUG*CUAG*CC

Length

18 nucleotides

Bulged bases

9MKK|1|A|U|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MKK|1|A|G|115
9MKK|1|A|A|116
9MKK|1|A|G|117
9MKK|1|A|U|118
9MKK|1|A|A|119
9MKK|1|A|A|120
9MKK|1|A|U|121
9MKK|1|A|G|122
9MKK|1|A|U|123
*
9MKK|1|A|A|238
9MKK|1|A|U|239
9MKK|1|A|G|240
*
9MKK|1|A|C|286
9MKK|1|A|U|287
9MKK|1|A|A|288
9MKK|1|A|G|289
*
9MKK|1|A|C|311
9MKK|1|A|C|312

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

Small ribosomal subunit protein bS16

Chain Q

Small ribosomal subunit protein uS17