J4_9MKK_002

3D structure

PDB id

9MKK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of arbekacin bound Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAG*CAUAACG*CCAAAGA*UUGC

Length

21 nucleotides

Bulged bases

9MKK|1|A|C|183, 9MKK|1|A|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MKK|1|A|G|142
9MKK|1|A|A|143
9MKK|1|A|G|144
*
9MKK|1|A|C|178
9MKK|1|A|A|179
9MKK|1|A|U|180
9MKK|1|A|A|181
9MKK|1|A|A|182
9MKK|1|A|C|183
9MKK|1|A|G|184
*
9MKK|1|A|C|193
9MKK|1|A|C|194
9MKK|1|A|A|195
9MKK|1|A|A|196
9MKK|1|A|A|197
9MKK|1|A|G|198
9MKK|1|A|A|199
*
9MKK|1|A|U|218
9MKK|1|A|U|219
9MKK|1|A|G|220
9MKK|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

Small ribosomal subunit protein bS20