J4_9MKK_005

3D structure

PDB id

9MKK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of arbekacin bound Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CC*GAGUAG*UGAAUAUG*CAAG

Length

20 nucleotides

Bulged bases

9MKK|1|a|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MKK|1|a|C|268
9MKK|1|a|C|269
*
9MKK|1|a|G|370
9MKK|1|a|A|371
9MKK|1|a|G|372
9MKK|1|a|U|373
9MKK|1|a|A|374
9MKK|1|a|G|375
*
9MKK|1|a|U|399
9MKK|1|a|G|400
9MKK|1|a|A|401
9MKK|1|a|A|402
9MKK|1|a|U|403
9MKK|1|a|A|404
9MKK|1|a|U|405
9MKK|1|a|G|406
*
9MKK|1|a|C|421
9MKK|1|a|A|422
9MKK|1|a|A|423
9MKK|1|a|G|424

Current chains

Chain a

23S rRNA

Nearby chains

Chain w

50S ribosomal protein L28