J4_9MKK_006

3D structure

PDB id

9MKK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of arbekacin bound Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAAG*CGCG*CAG*CGUAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MKK|1|a|G|297
9MKK|1|a|G|298
9MKK|1|a|A|299
9MKK|1|a|A|300
9MKK|1|a|G|301
*
9MKK|1|a|C|316
9MKK|1|a|G|317
9MKK|1|a|C|318
9MKK|1|a|G|319
*
9MKK|1|a|C|323
9MKK|1|a|A|324
9MKK|1|a|G|325
*
9MKK|1|a|C|337
9MKK|1|a|G|338
9MKK|1|a|U|339
9MKK|1|a|A|340
9MKK|1|a|C|341

Current chains

Chain a

23S rRNA

Nearby chains

Chain e

Large ribosomal subunit protein uL4

Chain t

50S ribosomal protein L24