J4_9MKK_009

3D structure

PDB id

9MKK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of arbekacin bound Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGUUC*GGUGAG*CU*AAUCGUAC

Length

21 nucleotides

Bulged bases

9MKK|1|a|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MKK|1|a|G|1310
9MKK|1|a|G|1311
9MKK|1|a|U|1312
9MKK|1|a|U|1313
9MKK|1|a|C|1314
*
9MKK|1|a|G|1338
9MKK|1|a|G|1339
9MKK|1|a|U|1340
9MKK|1|a|G|1341
9MKK|1|a|A|1342
9MKK|1|a|G|1343
*
9MKK|1|a|C|1404
9MKK|1|a|U|1405
*
9MKK|1|a|A|1597
9MKK|1|a|A|1598
9MKK|1|a|U|1599
9MKK|1|a|C|1600
9MKK|1|a|G|1601
9MKK|1|a|U|1602
9MKK|1|a|A|1603
9MKK|1|a|C|1604

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

50S ribosomal protein L34

Chain s

50S ribosomal protein L23