J4_9MR4_004

3D structure

PDB id

9MR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

NAC: Ribosome nascent chain complex(Oxa1L)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CAAAUAU*AGG*CAUGUU*AG

Length

18 nucleotides

Bulged bases

9MR4|1|5|A|2366, 9MR4|1|5|U|2369, 9MR4|1|5|U|2828

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MR4|1|5|C|2365
9MR4|1|5|A|2366
9MR4|1|5|A|2367
9MR4|1|5|A|2368
9MR4|1|5|U|2369
9MR4|1|5|A|2370
9MR4|1|5|U|2371
*
9MR4|1|5|A|2389
9MR4|1|5|G|2390
9MR4|1|5|G|2391
*
9MR4|1|5|C|2824
9MR4|1|5|A|2825
9MR4|1|5|U|2826
9MR4|1|5|G|2827
9MR4|1|5|U|2828
9MR4|1|5|U|2829
*
9MR4|1|5|A|3856
9MR4|1|5|G|3857

Current chains

Chain 5

28S rRNA

Nearby chains

Chain EF

Transcription factor BTF3

Chain P

Large ribosomal subunit protein uL22

Chain R

Large ribosomal subunit protein eL19

Chain d

eL31