J4_9MTQ_005

3D structure

PDB id

9MTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

UC*GGUUAG*CU*ACCCGUA

Length

17 nucleotides

Bulged bases

9MTQ|1|1A|U|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTQ|1|1A|U|1313
9MTQ|1|1A|C|1314
*
9MTQ|1|1A|G|1338
9MTQ|1|1A|G|1339
9MTQ|1|1A|U|1340
9MTQ|1|1A|U|1341
9MTQ|1|1A|A|1342
9MTQ|1|1A|G|1343
*
9MTQ|1|1A|C|1404
9MTQ|1|1A|U|1405
*
9MTQ|1|1A|A|1597
9MTQ|1|1A|C|1598
9MTQ|1|1A|C|1599
9MTQ|1|1A|C|1600
9MTQ|1|1A|G|1601
9MTQ|1|1A|U|1602
9MTQ|1|1A|A|1603

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 17

50S ribosomal protein L34

Chain 1X

50S ribosomal protein L23