J4_9MTS_021

3D structure

PDB id

9MTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GACUG*CACAG*CGAC*GUAAC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTS|1|2A|G|1772
9MTS|1|2A|A|1773
9MTS|1|2A|C|1774
9MTS|1|2A|U|1775
9MTS|1|2A|G|1776
*
9MTS|1|2A|C|1788
9MTS|1|2A|A|1789
9MTS|1|2A|C|1790
9MTS|1|2A|A|1791
9MTS|1|2A|G|1792
*
9MTS|1|2A|C|1827
9MTS|1|2A|G|1828
9MTS|1|2A|A|1829
9MTS|1|2A|C|1830
*
9MTS|1|2A|G|1975
9MTS|1|2A|U|1976
9MTS|1|2A|A|1977
9MTS|1|2A|A|1978
9MTS|1|2A|C|1979

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2D

50S ribosomal protein L2

Chain 2a

Small subunit ribosomal RNA; SSU rRNA