J4_9N70_001

3D structure

PDB id

9N70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State E

Experimental method

ELECTRON MICROSCOPY

Resolution

5.17 Å

Loop

Sequence

GUUAAAAAG*CGAAAG*CCAUAAACUAUG*UUC

Length

30 nucleotides

Bulged bases

9N70|1|L1|A|623, 9N70|1|L1|A|1026, 9N70|1|L1|C|1028, 9N70|1|L1|A|1030

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N70|1|L1|G|616
9N70|1|L1|U|617
9N70|1|L1|U|618
9N70|1|L1|A|619
9N70|1|L1|A|620
9N70|1|L1|A|621
9N70|1|L1|A|622
9N70|1|L1|A|623
9N70|1|L1|G|624
*
9N70|1|L1|C|975
9N70|1|L1|G|976
9N70|1|L1|A|977
9N70|1|L1|A|978
9N70|1|L1|A|979
9N70|1|L1|G|980
*
9N70|1|L1|C|1021
9N70|1|L1|C|1022
9N70|1|L1|A|1023
9N70|1|L1|U|1024
9N70|1|L1|A|1025
9N70|1|L1|A|1026
9N70|1|L1|A|1027
9N70|1|L1|C|1028
9N70|1|L1|U|1029
9N70|1|L1|A|1030
9N70|1|L1|U|1031
9N70|1|L1|G|1032
*
9N70|1|L1|U|1103
9N70|1|L1|U|1104
9N70|1|L1|C|1105

Current chains

Chain L1

18S rRNA

Nearby chains

Chain LE

40S ribosomal protein S22-A

Chain NF

40S ribosomal protein S13