J4_9N72_001

3D structure

PDB id

9N72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State F

Experimental method

ELECTRON MICROSCOPY

Resolution

5.94 Å

Loop

Sequence

GUUAAAAAG*CGAAAG*CCAUAAACUAUG*UUC

Length

30 nucleotides

Bulged bases

9N72|1|L1|A|623, 9N72|1|L1|A|1026, 9N72|1|L1|C|1028, 9N72|1|L1|A|1030

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N72|1|L1|G|616
9N72|1|L1|U|617
9N72|1|L1|U|618
9N72|1|L1|A|619
9N72|1|L1|A|620
9N72|1|L1|A|621
9N72|1|L1|A|622
9N72|1|L1|A|623
9N72|1|L1|G|624
*
9N72|1|L1|C|975
9N72|1|L1|G|976
9N72|1|L1|A|977
9N72|1|L1|A|978
9N72|1|L1|A|979
9N72|1|L1|G|980
*
9N72|1|L1|C|1021
9N72|1|L1|C|1022
9N72|1|L1|A|1023
9N72|1|L1|U|1024
9N72|1|L1|A|1025
9N72|1|L1|A|1026
9N72|1|L1|A|1027
9N72|1|L1|C|1028
9N72|1|L1|U|1029
9N72|1|L1|A|1030
9N72|1|L1|U|1031
9N72|1|L1|G|1032
*
9N72|1|L1|U|1103
9N72|1|L1|U|1104
9N72|1|L1|C|1105

Current chains

Chain L1

18S rRNA

Nearby chains

Chain LE

40S ribosomal protein S22-A

Chain NF

40S ribosomal protein S13