J4_9N9J_006

3D structure

PDB id

9N9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

9N9J|1|L5|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N9J|1|L5|G|2618
9N9J|1|L5|G|2619
*
9N9J|1|L5|U|2637
9N9J|1|L5|G|2638
9N9J|1|L5|U|2639
9N9J|1|L5|G|2640
9N9J|1|L5|A|2641
9N9J|1|L5|A|2642
*
9N9J|1|L5|U|2692
9N9J|1|L5|G|2693
9N9J|1|L5|G|2694
9N9J|1|L5|A|2695
9N9J|1|L5|A|2696
9N9J|1|L5|A|2697
9N9J|1|L5|G|2698
*
9N9J|1|L5|U|2718
9N9J|1|L5|C|2719

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LR

Large ribosomal subunit protein eL19

Chain LU

Large ribosomal subunit protein eL22

Chain Lg

Large ribosomal subunit protein eL34

Chain Lk

Large ribosomal subunit protein eL38