J4_9NO7_004

3D structure

PDB id

9NO7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site 2'-deoxy-A76-fMEAAAKC-peptidyl-tRNAcys at 2.13A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.13 Å

Loop

Sequence

GGUUC*GGUUAG*CU*ACCCGUAC

Length

21 nucleotides

Bulged bases

9NO7|1|A|U|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NO7|1|A|G|1310
9NO7|1|A|G|1311
9NO7|1|A|U|1312
9NO7|1|A|U|1313
9NO7|1|A|C|1314
*
9NO7|1|A|G|1338
9NO7|1|A|G|1339
9NO7|1|A|U|1340
9NO7|1|A|U|1341
9NO7|1|A|A|1342
9NO7|1|A|G|1343
*
9NO7|1|A|C|1404
9NO7|1|A|U|1405
*
9NO7|1|A|A|1597
9NO7|1|A|C|1598
9NO7|1|A|C|1599
9NO7|1|A|C|1600
9NO7|1|A|G|1601
9NO7|1|A|U|1602
9NO7|1|A|A|1603
9NO7|1|A|C|1604

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 7

50S ribosomal protein L34

Chain X

50S ribosomal protein L23