J4_9O2X_005
3D structure
- PDB id
- 9O2X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (S)-betahydroxyBocK charged NH-tRNAPyl
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.29 Å
Loop
- Sequence
- GUGG*CGU*AAGGUCG*CC
- Length
- 16 nucleotides
- Bulged bases
- 9O2X|1|Z|U|8, 9O2X|1|Z|U|47, 9O2X|1|Z|C|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9O2X|1|Z|G|7
9O2X|1|Z|U|8
9O2X|1|Z|G|9
9O2X|1|Z|G|10
*
9O2X|1|Z|C|25
9O2X|1|Z|G|26
9O2X|1|Z|U|27
*
9O2X|1|Z|A|43
9O2X|1|Z|A|44
9O2X|1|Z|G|45
9O2X|1|Z|G|46
9O2X|1|Z|U|47
9O2X|1|Z|C|48
9O2X|1|Z|G|49
*
9O2X|1|Z|C|65
9O2X|1|Z|C|66
Current chains
- Chain Z
- P-site tRNA fMet
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain M
- Small ribosomal subunit protein uS13
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain l
- Large ribosomal subunit protein uL16
Coloring options: