J4_9O3J_001

3D structure

PDB id

9O3J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type drug-free Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CU*GAGUAC*GGAAUCUG*UAAG

Length

20 nucleotides

Bulged bases

9O3J|1|1A|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3J|1|1A|C|268
9O3J|1|1A|U|269
*
9O3J|1|1A|G|370
9O3J|1|1A|A|371
9O3J|1|1A|G|372
9O3J|1|1A|U|373
9O3J|1|1A|A|374
9O3J|1|1A|C|375
*
9O3J|1|1A|G|399
9O3J|1|1A|G|400
9O3J|1|1A|A|401
9O3J|1|1A|A|402
9O3J|1|1A|U|403
9O3J|1|1A|C|404
9O3J|1|1A|U|405
9O3J|1|1A|G|406
*
9O3J|1|1A|U|421
9O3J|1|1A|A|422
9O3J|1|1A|A|423
9O3J|1|1A|G|424

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 11

50S ribosomal protein L28

Chain 1I

50S ribosomal protein L9