J4_9OFV_009

3D structure

PDB id

9OFV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.16 Å

Loop

Sequence

UAA*UC*GCU*AUG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9OFV|1|f|U|3010
9OFV|1|f|A|3011
9OFV|1|f|A|3012
*
9OFV|1|f|U|3042
9OFV|1|f|C|3043
*
9OFV|1|f|G|3098
9OFV|1|f|C|3099
9OFV|1|f|U|3100
*
9OFV|1|f|A|3134
9OFV|1|f|U|3135
9OFV|1|f|G|3136

Current chains

Chain f

25S rRNA

Nearby chains

Chain I

60S ribosomal protein L23-A

Chain a0

60S ribosomal protein L16-A

Chain k

Large ribosomal subunit protein uL3