J4_9OFV_011
3D structure
- PDB id
- 9OFV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.16 Å
Loop
- Sequence
- GUGG*CGC*GAGGUCU*AC
- Length
- 16 nucleotides
- Bulged bases
- 9OFV|1|y|U|8, 9OFV|1|y|U|47, 9OFV|1|y|C|48
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9OFV|1|y|G|7
9OFV|1|y|U|8
9OFV|1|y|G|9
9OFV|1|y|G|10
*
9OFV|1|y|C|25
9OFV|1|y|G|26
9OFV|1|y|C|27
*
9OFV|1|y|G|43
9OFV|1|y|A|44
9OFV|1|y|G|45
9OFV|1|y|G|46
9OFV|1|y|U|47
9OFV|1|y|C|48
9OFV|1|y|U|49
*
9OFV|1|y|A|65
9OFV|1|y|C|66
Current chains
- Chain y
- Ala tRNA
Nearby chains
- Chain a
- Ribosome quality control complex subunit 2
- Chain f
- Large subunit ribosomal RNA; LSU rRNA
- Chain r
- Large ribosomal subunit protein uL16
Coloring options: