J4_9OWX_002

3D structure

PDB id

9OWX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Geobacillus stearothermophilus RNase P holoenzyme in complex with the precursor tRNA with loop-back 5' leader (sub-conformation 1 of tRNA anticodon arm tilted)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUAG*CAC*GGGGUCG*UC

Length

16 nucleotides

Bulged bases

9OWX|1|C|U|8, 9OWX|1|C|U|46, 9OWX|1|C|C|47

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_9OWX_002 not in the Motif Atlas

Homologous match to J4_7U2J_014

Geometric discrepancy: 0.3328

The information below is about J4_7U2J_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9OWX|1|C|G|7
9OWX|1|C|U|8
9OWX|1|C|A|9
9OWX|1|C|G|10
*
9OWX|1|C|C|24
9OWX|1|C|A|25
9OWX|1|C|C|26
*
9OWX|1|C|G|42
9OWX|1|C|G|43
9OWX|1|C|G|44
9OWX|1|C|G|45
9OWX|1|C|U|46
9OWX|1|C|C|47
9OWX|1|C|G|48
*
9OWX|1|C|U|64
9OWX|1|C|C|65

Current chains

Chain C

precursor RNA (108-MER)

Nearby chains

Chain B

Ribonuclease P protein component

Chain A

Ribonuclease P class B; RNase P class B