J4_9PJ7_002

3D structure

PDB id

9PJ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Doxycycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UU*GAUAGGA*UGGAAAG*CG

Length

18 nucleotides

Bulged bases

9PJ7|1|A|G|184

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PJ7|1|A|U|144
9PJ7|1|A|U|145
*
9PJ7|1|A|G|179
9PJ7|1|A|A|180
9PJ7|1|A|U|181
9PJ7|1|A|A|182
9PJ7|1|A|G|183
9PJ7|1|A|G|184
9PJ7|1|A|A|185
*
9PJ7|1|A|U|208
9PJ7|1|A|G|209
9PJ7|1|A|G|210
9PJ7|1|A|A|211
9PJ7|1|A|A|212
9PJ7|1|A|A|213
9PJ7|1|A|G|214
*
9PJ7|1|A|C|221
9PJ7|1|A|G|222

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20