J4_9PJ7_005

3D structure

PDB id

9PJ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Doxycycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUAAAC*GGGUUG*CUG*CAAG

Length

19 nucleotides

Bulged bases

9PJ7|1|a|U|322, 9PJ7|1|a|U|494

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PJ7|1|a|C|275
9PJ7|1|a|U|276
9PJ7|1|a|A|277
9PJ7|1|a|A|278
9PJ7|1|a|A|279
9PJ7|1|a|C|280
*
9PJ7|1|a|G|318
9PJ7|1|a|G|319
9PJ7|1|a|G|320
9PJ7|1|a|U|321
9PJ7|1|a|U|322
9PJ7|1|a|G|323
*
9PJ7|1|a|C|493
9PJ7|1|a|U|494
9PJ7|1|a|G|495
*
9PJ7|1|a|C|510
9PJ7|1|a|A|511
9PJ7|1|a|A|512
9PJ7|1|a|G|513

Current chains

Chain a

23S rRNA

Nearby chains