J4_9PJ7_011

3D structure

PDB id

9PJ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Doxycycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AUC*GC*GGGAGC*GGUGAGU

Length

18 nucleotides

Bulged bases

9PJ7|1|a|U|1625

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PJ7|1|a|A|1624
9PJ7|1|a|U|1625
9PJ7|1|a|C|1626
*
9PJ7|1|a|G|1647
9PJ7|1|a|C|1648
*
9PJ7|1|a|G|1707
9PJ7|1|a|G|1708
9PJ7|1|a|G|1709
9PJ7|1|a|A|1710
9PJ7|1|a|G|1711
9PJ7|1|a|C|1712
*
9PJ7|1|a|G|1724
9PJ7|1|a|G|1725
9PJ7|1|a|U|1726
9PJ7|1|a|G|1727
9PJ7|1|a|A|1728
9PJ7|1|a|G|1729
9PJ7|1|a|U|1730

Current chains

Chain a

23S rRNA

Nearby chains