J4_9PR4_003

3D structure

PDB id

9PR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In Situ Structure of the Human Mitochondrial Large Subunit 39S in Complex with TACO1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GCCUG*CAUCAC*GCACCG*CUCCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PR4|1|A|G|2492
9PR4|1|A|C|2493
9PR4|1|A|C|2494
9PR4|1|A|U|2495
9PR4|1|A|G|2496
*
9PR4|1|A|C|2508
9PR4|1|A|A|2509
9PR4|1|A|U|2510
9PR4|1|A|C|2511
9PR4|1|A|A|2512
9PR4|1|A|C|2513
*
9PR4|1|A|G|2537
9PR4|1|A|C|2538
9PR4|1|A|A|2539
9PR4|1|A|C|2540
9PR4|1|A|C|2541
9PR4|1|A|G|2542
*
9PR4|1|A|C|2637
9PR4|1|A|U|2638
9PR4|1|A|C|2639
9PR4|1|A|C|2640
9PR4|1|A|A|2641
9PR4|1|A|C|2642

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial