J4_9PR4_004

3D structure

PDB id

9PR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In Situ Structure of the Human Mitochondrial Large Subunit 39S in Complex with TACO1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

CUG*CC*GCAAAGGUAG*UGAAUG

Length

21 nucleotides

Bulged bases

9PR4|1|A|U|2634

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PR4|1|A|C|2544
9PR4|1|A|U|2545
9PR4|1|A|G|2546
*
9PR4|1|A|C|2569
9PR4|1|A|C|2570
*
9PR4|1|A|G|2587
9PR4|1|A|C|2588
9PR4|1|A|A|2589
9PR4|1|A|A|2590
9PR4|1|A|A|2591
9PR4|1|A|G|2592
9PR4|1|A|G|2593
9PR4|1|A|U|2594
9PR4|1|A|A|2595
9PR4|1|A|G|2596
*
9PR4|1|A|U|2630
9PR4|1|A|G|2631
9PR4|1|A|A|2632
9PR4|1|A|A|2633
9PR4|1|A|U|2634
9PR4|1|A|G|2635

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial