J4_9PZG_002

3D structure

PDB id

9PZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial ribosomal 2'-O-methyltransferase RsmI in complex with the small ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

9PZG|1|A|C|183, 9PZG|1|A|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PZG|1|A|G|142
9PZG|1|A|A|143
9PZG|1|A|G|144
*
9PZG|1|A|C|178
9PZG|1|A|A|179
9PZG|1|A|U|180
9PZG|1|A|A|181
9PZG|1|A|A|182
9PZG|1|A|C|183
9PZG|1|A|G|184
*
9PZG|1|A|C|193
9PZG|1|A|C|194
9PZG|1|A|A|195
9PZG|1|A|A|196
9PZG|1|A|A|197
9PZG|1|A|G|198
*
9PZG|1|A|U|219
9PZG|1|A|G|220
9PZG|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

Small ribosomal subunit protein bS20