J4_9QEG_013

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GAGUAACAC*GCU*AUAG*CC

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QEG|1|Aa|G|114
9QEG|1|Aa|A|115
9QEG|1|Aa|G|116
9QEG|1|Aa|U|117
9QEG|1|Aa|A|118
9QEG|1|Aa|A|119
9QEG|1|Aa|C|120
9QEG|1|Aa|A|121
9QEG|1|Aa|C|122
*
9QEG|1|Aa|G|246
9QEG|1|Aa|C|247
9QEG|1|Aa|U|248
*
9QEG|1|Aa|A|294
9QEG|1|Aa|U|295
9QEG|1|Aa|A|296
9QEG|1|Aa|G|297
*
9QEG|1|Aa|C|319
9QEG|1|Aa|C|320

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Al

Small ribosomal subunit protein uS12

Chain Ap

Small ribosomal subunit protein bS16

Chain Aq

Small ribosomal subunit protein uS17