J4_9QEG_014

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GAC*GAUAAUAU*AGUGAAAG*CAC

Length

22 nucleotides

Bulged bases

9QEG|1|Aa|U|183, 9QEG|1|Aa|A|212

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QEG|1|Aa|G|142
9QEG|1|Aa|A|143
9QEG|1|Aa|C|144
*
9QEG|1|Aa|G|178
9QEG|1|Aa|A|179
9QEG|1|Aa|U|180
9QEG|1|Aa|A|181
9QEG|1|Aa|A|182
9QEG|1|Aa|U|183
9QEG|1|Aa|A|184
9QEG|1|Aa|U|185
*
9QEG|1|Aa|A|206
9QEG|1|Aa|G|207
9QEG|1|Aa|U|208
9QEG|1|Aa|G|209
9QEG|1|Aa|A|210
9QEG|1|Aa|A|211
9QEG|1|Aa|A|212
9QEG|1|Aa|G|213
*
9QEG|1|Aa|C|227
9QEG|1|Aa|A|228
9QEG|1|Aa|C|229

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Ap

Small ribosomal subunit protein bS16

Chain At

Small ribosomal subunit protein bS20