J4_9QLQ_005

3D structure

PDB id

9QLQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - alternative State

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

CAAAUAU*AGG*CAUGUU*AG

Length

18 nucleotides

Bulged bases

9QLQ|1|L5|A|2366, 9QLQ|1|L5|U|2369, 9QLQ|1|L5|U|2828

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLQ|1|L5|C|2365
9QLQ|1|L5|A|2366
9QLQ|1|L5|A|2367
9QLQ|1|L5|A|2368
9QLQ|1|L5|U|2369
9QLQ|1|L5|A|2370
9QLQ|1|L5|U|2371
*
9QLQ|1|L5|A|2389
9QLQ|1|L5|G|2390
9QLQ|1|L5|G|2391
*
9QLQ|1|L5|C|2824
9QLQ|1|L5|A|2825
9QLQ|1|L5|U|2826
9QLQ|1|L5|G|2827
9QLQ|1|L5|U|2828
9QLQ|1|L5|U|2829
*
9QLQ|1|L5|A|3856
9QLQ|1|L5|G|3857

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LP

60S ribosomal protein L17

Chain LR

60S ribosomal protein L19

Chain Ld

60S ribosomal protein L31

Chain NB

Isoform 2 of Transcription factor BTF3