J4_9QQA_004

3D structure

PDB id

9QQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and NMT1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CC*GAGUCG*CAAAGCG*UAAG

Length

19 nucleotides

Bulged bases

9QQA|1|B5|C|309

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQA|1|B5|C|111
9QQA|1|B5|C|112
*
9QQA|1|B5|G|278
9QQA|1|B5|A|279
9QQA|1|B5|G|280
9QQA|1|B5|U|281
9QQA|1|B5|C|282
9QQA|1|B5|G|283
*
9QQA|1|B5|C|304
9QQA|1|B5|A|305
9QQA|1|B5|A|306
9QQA|1|B5|A|307
9QQA|1|B5|G|308
9QQA|1|B5|C|309
9QQA|1|B5|G|310
*
9QQA|1|B5|U|327
9QQA|1|B5|A|328
9QQA|1|B5|A|329
9QQA|1|B5|G|330

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BL

Large ribosomal subunit protein eL13

Chain BN

Ribosomal protein L15

Chain Bh

60S ribosomal protein L35

Chain Bi

60S ribosomal protein L36