J4_9QQA_012

3D structure

PDB id

9QQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and NMT1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

9QQA|1|B5|A|2539

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQA|1|B5|G|2461
9QQA|1|B5|G|2462
*
9QQA|1|B5|U|2480
9QQA|1|B5|G|2481
9QQA|1|B5|U|2482
9QQA|1|B5|G|2483
9QQA|1|B5|A|2484
9QQA|1|B5|A|2485
*
9QQA|1|B5|U|2535
9QQA|1|B5|G|2536
9QQA|1|B5|G|2537
9QQA|1|B5|A|2538
9QQA|1|B5|A|2539
9QQA|1|B5|A|2540
9QQA|1|B5|G|2541
*
9QQA|1|B5|U|2561
9QQA|1|B5|C|2562

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BR

Ribosomal protein L19

Chain BU

60S ribosomal protein L22

Chain Bg

60S ribosomal protein L34

Chain Bk

60S ribosomal protein L38