J4_9QQB_003
3D structure
- PDB id
- 9QQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- GUAG*CGU*AAGGUCC*GC
- Length
- 16 nucleotides
- Bulged bases
- 9QQB|1|AT|U|8, 9QQB|1|AT|U|47, 9QQB|1|AT|C|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QQB|1|AT|G|7
9QQB|1|AT|U|8
9QQB|1|AT|A|9
9QQB|1|AT|G|10
*
9QQB|1|AT|C|25
9QQB|1|AT|G|26
9QQB|1|AT|U|27
*
9QQB|1|AT|A|43
9QQB|1|AT|A|44
9QQB|1|AT|G|45
9QQB|1|AT|G|46
9QQB|1|AT|U|47
9QQB|1|AT|C|48
9QQB|1|AT|C|49
*
9QQB|1|AT|G|65
9QQB|1|AT|C|66
Current chains
- Chain AT
- P site Phe tRNA
Nearby chains
- Chain A2
- Small subunit ribosomal RNA; SSU rRNA
- Chain Ar
- Small ribosomal subunit protein uS13
- Chain Ay
- Small ribosomal subunit protein eS25
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
- Chain BI
- 60S ribosomal protein L10
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