J4_9QQB_004

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CC*GAGUCG*CAAAGCG*UAAG

Length

19 nucleotides

Bulged bases

9QQB|1|B5|C|309

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQB|1|B5|C|111
9QQB|1|B5|C|112
*
9QQB|1|B5|G|278
9QQB|1|B5|A|279
9QQB|1|B5|G|280
9QQB|1|B5|U|281
9QQB|1|B5|C|282
9QQB|1|B5|G|283
*
9QQB|1|B5|C|304
9QQB|1|B5|A|305
9QQB|1|B5|A|306
9QQB|1|B5|A|307
9QQB|1|B5|G|308
9QQB|1|B5|C|309
9QQB|1|B5|G|310
*
9QQB|1|B5|U|327
9QQB|1|B5|A|328
9QQB|1|B5|A|329
9QQB|1|B5|G|330

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BL

Large ribosomal subunit protein eL13

Chain BN

Ribosomal protein L15

Chain Bh

60S ribosomal protein L35

Chain Bi

60S ribosomal protein L36