J4_9QQB_005

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CAAG*CCCAGCCC*GAC*GGUAG

Length

20 nucleotides

Bulged bases

9QQB|1|B5|G|219

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQB|1|B5|C|196
9QQB|1|B5|A|197
9QQB|1|B5|A|198
9QQB|1|B5|G|199
*
9QQB|1|B5|C|215
9QQB|1|B5|C|216
9QQB|1|B5|C|217
9QQB|1|B5|A|218
9QQB|1|B5|G|219
9QQB|1|B5|C|220
9QQB|1|B5|C|221
9QQB|1|B5|C|222
*
9QQB|1|B5|G|226
9QQB|1|B5|A|227
9QQB|1|B5|C|228
*
9QQB|1|B5|G|240
9QQB|1|B5|G|241
9QQB|1|B5|U|242
9QQB|1|B5|A|243
9QQB|1|B5|G|244

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BC

Large ribosomal subunit protein uL4

Chain BY

Ribosomal protein L26

Chain XA

N-alpha-acetyltransferase 15, NatA auxiliary subunit