J4_9QQB_007

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CUC*GCC*GG*CGAGCG

Length

14 nucleotides

Bulged bases

9QQB|1|B5|G|1215, 9QQB|1|B5|C|1216

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQB|1|B5|C|883
9QQB|1|B5|U|884
9QQB|1|B5|C|885
*
9QQB|1|B5|G|985
9QQB|1|B5|C|986
9QQB|1|B5|C|987
*
9QQB|1|B5|G|1126
9QQB|1|B5|G|1127
*
9QQB|1|B5|C|1212
9QQB|1|B5|G|1213
9QQB|1|B5|A|1214
9QQB|1|B5|G|1215
9QQB|1|B5|C|1216
9QQB|1|B5|G|1217

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BE

60S ribosomal protein L6

Chain BF

Ribosomal Protein uL30

Chain Bb

60S ribosomal protein L29