J4_9QQB_012

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

9QQB|1|B5|A|2539

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQB|1|B5|G|2461
9QQB|1|B5|G|2462
*
9QQB|1|B5|U|2480
9QQB|1|B5|G|2481
9QQB|1|B5|U|2482
9QQB|1|B5|G|2483
9QQB|1|B5|A|2484
9QQB|1|B5|A|2485
*
9QQB|1|B5|U|2535
9QQB|1|B5|G|2536
9QQB|1|B5|G|2537
9QQB|1|B5|A|2538
9QQB|1|B5|A|2539
9QQB|1|B5|A|2540
9QQB|1|B5|G|2541
*
9QQB|1|B5|U|2561
9QQB|1|B5|C|2562

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BR

Ribosomal protein L19

Chain BU

60S ribosomal protein L22

Chain Bg

60S ribosomal protein L34

Chain Bk

60S ribosomal protein L38