J4_9QQQ_008
3D structure
- PDB id
- 9QQQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of SKM-70S ribosomal stalled complex in the major state (vacant A-site, canon)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.26 Å
Loop
- Sequence
- CAAG*CGAAG*CGAG*CGUUAAG
- Length
- 20 nucleotides
- Bulged bases
- 9QQQ|1|a|A|654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QQQ|1|a|C|601
9QQQ|1|a|A|602
9QQQ|1|a|A|603
9QQQ|1|a|G|604
*
9QQQ|1|a|C|624
9QQQ|1|a|G|625
9QQQ|1|a|A|626
9QQQ|1|a|A|627
9QQQ|1|a|G|628
*
9QQQ|1|a|C|635
9QQQ|1|a|G|636
9QQQ|1|a|A|637
9QQQ|1|a|G|638
*
9QQQ|1|a|C|650
9QQQ|1|a|G|651
9QQQ|1|a|U|652
9QQQ|1|a|U|653
9QQQ|1|a|A|654
9QQQ|1|a|A|655
9QQQ|1|a|G|656
Current chains
- Chain a
- E. coli 23S rRNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL35
- Chain e
- Large ribosomal subunit protein uL4
- Chain k
- Large ribosomal subunit protein uL15
Coloring options: