J4_9RHU_006

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CUC*GCC*GG*CGAGCG

Length

14 nucleotides

Bulged bases

9RHU|1|A3|G|1215, 9RHU|1|A3|C|1216

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|C|883
9RHU|1|A3|U|884
9RHU|1|A3|C|885
*
9RHU|1|A3|G|985
9RHU|1|A3|C|986
9RHU|1|A3|C|987
*
9RHU|1|A3|G|1126
9RHU|1|A3|G|1127
*
9RHU|1|A3|C|1212
9RHU|1|A3|G|1213
9RHU|1|A3|A|1214
9RHU|1|A3|G|1215
9RHU|1|A3|C|1216
9RHU|1|A3|G|1217

Current chains

Chain A3

28S rRNA

Nearby chains

Chain A2

60S ribosomal protein L6

Chain B2

60S ribosomal protein L7

Chain X2

60S ribosomal protein L29