J4_9RHU_014

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CUAAG*UUG*CC*GGG

Length

13 nucleotides

Bulged bases

9RHU|1|A3|A|3980

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|C|3977
9RHU|1|A3|U|3978
9RHU|1|A3|A|3979
9RHU|1|A3|A|3980
9RHU|1|A3|G|3981
*
9RHU|1|A3|U|4035
9RHU|1|A3|U|4036
9RHU|1|A3|G|4037
*
9RHU|1|A3|C|4064
9RHU|1|A3|C|4065
*
9RHU|1|A3|G|4074
9RHU|1|A3|G|4075
9RHU|1|A3|G|4076

Current chains

Chain A3

28S rRNA

Nearby chains

Chain G3

Large ribosomal subunit protein uL18

Chain P2

60S ribosomal protein L21

Chain j2

Ribosomal protein L36a