J4_9RPV_019
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- (OMC)AAAUAU*AGG*(OMC)AUGUU*AG
- Length
- 18 nucleotides
- Bulged bases
- 9RPV|1|M5|A|2366, 9RPV|1|M5|U|2369, 9RPV|1|M5|U|2828
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RPV|1|M5|OMC|2365
9RPV|1|M5|A|2366
9RPV|1|M5|A|2367
9RPV|1|M5|A|2368
9RPV|1|M5|U|2369
9RPV|1|M5|A|2370
9RPV|1|M5|U|2371
*
9RPV|1|M5|A|2389
9RPV|1|M5|G|2390
9RPV|1|M5|G|2391
*
9RPV|1|M5|OMC|2824
9RPV|1|M5|A|2825
9RPV|1|M5|U|2826
9RPV|1|M5|G|2827
9RPV|1|M5|U|2828
9RPV|1|M5|U|2829
*
9RPV|1|M5|A|3856
9RPV|1|M5|G|3857
Current chains
- Chain M5
- 28S rRNA of the stalled 80S
Nearby chains
- Chain MP
- 60S ribosomal protein L17
- Chain MR
- 60S ribosomal protein L19
- Chain Md
- 60S ribosomal protein L31
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