J4_9RTV_002

3D structure

PDB id

9RTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAAG*CGAAG*CGAG*CGUUAAG

Length

20 nucleotides

Bulged bases

9RTV|1|A|U|653, 9RTV|1|A|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RTV|1|A|C|601
9RTV|1|A|A|602
9RTV|1|A|A|603
9RTV|1|A|G|604
*
9RTV|1|A|C|624
9RTV|1|A|G|625
9RTV|1|A|A|626
9RTV|1|A|A|627
9RTV|1|A|G|628
*
9RTV|1|A|C|635
9RTV|1|A|G|636
9RTV|1|A|A|637
9RTV|1|A|G|638
*
9RTV|1|A|C|650
9RTV|1|A|G|651
9RTV|1|A|U|652
9RTV|1|A|U|653
9RTV|1|A|A|654
9RTV|1|A|A|655
9RTV|1|A|G|656

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L35

Chain E

50S ribosomal protein L4

Chain L

50S ribosomal protein L15