J4_9SYH_001

3D structure

PDB id

9SYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from deltaRlmE strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.89 Å

Loop

Sequence

GAGUAAUG*UG*CUAG*CC

Length

16 nucleotides

Bulged bases

9SYH|1|A|U|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYH|1|A|G|115
9SYH|1|A|A|116
9SYH|1|A|G|117
9SYH|1|A|U|118
9SYH|1|A|A|119
9SYH|1|A|A|120
9SYH|1|A|U|121
9SYH|1|A|G|122
*
9SYH|1|A|U|239
9SYH|1|A|G|240
*
9SYH|1|A|C|286
9SYH|1|A|U|287
9SYH|1|A|A|288
9SYH|1|A|G|289
*
9SYH|1|A|C|311
9SYH|1|A|C|312

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

Small ribosomal subunit protein bS16

Chain Q

Small ribosomal subunit protein uS17