J4_9SYH_002

3D structure

PDB id

9SYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from deltaRlmE strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.89 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

9SYH|1|A|C|183

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYH|1|A|G|142
9SYH|1|A|A|143
9SYH|1|A|G|144
*
9SYH|1|A|C|178
9SYH|1|A|A|179
9SYH|1|A|U|180
9SYH|1|A|A|181
9SYH|1|A|A|182
9SYH|1|A|C|183
9SYH|1|A|G|184
*
9SYH|1|A|C|193
9SYH|1|A|C|194
9SYH|1|A|A|195
9SYH|1|A|A|196
9SYH|1|A|A|197
9SYH|1|A|G|198
*
9SYH|1|A|U|219
9SYH|1|A|G|220
9SYH|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

Small ribosomal subunit protein bS20