J4_9SYR_001

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

CC*GAGUCG*CAAAGCG*UAAG

Length

19 nucleotides

Bulged bases

9SYR|1|L1|C|309

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|C|111
9SYR|1|L1|C|112
*
9SYR|1|L1|G|278
9SYR|1|L1|A|279
9SYR|1|L1|G|280
9SYR|1|L1|U|281
9SYR|1|L1|C|282
9SYR|1|L1|G|283
*
9SYR|1|L1|C|304
9SYR|1|L1|A|305
9SYR|1|L1|A|306
9SYR|1|L1|A|307
9SYR|1|L1|G|308
9SYR|1|L1|C|309
9SYR|1|L1|G|310
*
9SYR|1|L1|U|327
9SYR|1|L1|A|328
9SYR|1|L1|A|329
9SYR|1|L1|G|330

Current chains

Chain L1

28S rRNA

Nearby chains

Chain LH

60S ribosomal protein L15

Chain LP

Large ribosomal subunit protein eL13

Chain Ly

60S ribosomal protein L35

Chain Lz

60S ribosomal protein L36