J4_9SYR_002

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

CAAG*CCCAGCCC*GAC*GGUAG

Length

20 nucleotides

Bulged bases

9SYR|1|L1|A|218, 9SYR|1|L1|G|219

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|C|196
9SYR|1|L1|A|197
9SYR|1|L1|A|198
9SYR|1|L1|G|199
*
9SYR|1|L1|C|215
9SYR|1|L1|C|216
9SYR|1|L1|C|217
9SYR|1|L1|A|218
9SYR|1|L1|G|219
9SYR|1|L1|C|220
9SYR|1|L1|C|221
9SYR|1|L1|C|222
*
9SYR|1|L1|G|226
9SYR|1|L1|A|227
9SYR|1|L1|C|228
*
9SYR|1|L1|G|240
9SYR|1|L1|G|241
9SYR|1|L1|U|242
9SYR|1|L1|A|243
9SYR|1|L1|G|244

Current chains

Chain L1

28S rRNA

Nearby chains

Chain Lc

60S ribosomal protein L4

Chain Lp

60S ribosomal protein L26